BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H07SP1|AL429480
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1711 1696 0.0
>3x_Contig1711
Length = 15491
Score = 1696 bits (849), Expect = 0.0
Identities = 875/887 (98%), Gaps = 2/887 (0%)
Strand = Plus / Plus
Query: 1 tatcgcatgagchccattcgagattcggtttcaacaacctccaaattggtgcttgttacg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6442 tatcgcatgagctccattcgagattcggtttcaacaacctccaaattggtgcttgttacg 6501
Query: 61 tgtgtcctggtattggattactatgtggttcattaagtggaggtcacctatcagattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6502 tgtgtcctggtattggattactatgtggttcattaagtggaggtcacctatcagattttt 6561
Query: 121 tcaaggcaaaatcaaagaaatggattccagagtataggctctggtttcaaatttggggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6562 tcaaggcaaaatcaaagaaatggattccagagtataggctctggtttcaaatttggggtc 6621
Query: 181 tagcgattagcatggccggttgctgcggttttggctgggccattgaaaaggaactacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6622 tagcgattagcatggccggttgctgcggttttggctgggccattgaaaaggaactacata 6681
Query: 241 tagtcgttatattggttttttctttcttgttggcattcggtatgacgtggtgctcaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6682 tagtcgttatattggttttttctttcttgttggcattcggtatgacgtggtgctcaaatg 6741
Query: 301 cyacgawgacattwttgacagaactggataggaaaaagacagcmaccctggtttctatca 360
| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6742 ctacgatgacatttttgacagaactggataggaaaaagacagcaaccctggtttctatca 6801
Query: 361 gtagttttttcagaaacgcagccgcagcagtagcatcagcaatagttttcaaattaatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6802 gtagttttttcagaaacgcagccgcagcagtagcatcagcaatagttttcaaattaatcg 6861
Query: 421 aggcaatgggggctggatggtgtttcactggtcttgcattctgtgactgtgctacgatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6862 aggcaatgggggctggatggtgtttcactggtcttgcattctgtgactgtgctacgatcg 6921
Query: 481 ctggaatcgtgtatctaatgatcaaaggtaaaaaacgtagacagtcttcgcaaagtgacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6922 ctggaatcgtgtatctaatgatcaaaggtaaaaaacgtagacagtcttcgcaaagtgacg 6981
Query: 541 tatgaatctattcyaaccttatttacataaacaaatattaagcttataactatyacyaac 600
||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 6982 tatgattctattctaaccttatttacataaacaaatattaagcttataactattactaac 7041
Query: 601 caatagtgattacgtagggttatatataayggggtcctatcattgtgttatacatatact 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 7042 caatagtgattacgtagggttatatataatggggtcctatcattgtgttatacatatact 7101
Query: 661 ggggtcctatcactatgttttttacatttaatggggtcttatcactttgttccctgatag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7102 ggggtcctatcactatgttttttacatttaatggggtcttatcactttgttccctgatag 7161
Query: 721 aacctctcgaatgaatgatcggtcttaaggatccagaagaagaacagaaaagaaatgctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7162 aacctctcgaatgaatgatcggtcttaaggatccagaagaagaacagaaaagaaatgctc 7221
Query: 781 tcagccaataagaatccggaattgactcatgtcgcctccacaattatggcccttggatgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7222 tcagccaataagaatccggaattgactcatgtcgcctccacaattatggcccttggatgc 7281
Query: 841 g-cccgctgcccacctgtctaggctgt-catttttacaatacataca 885
| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7282 gccccgctgcccacctgtctaggctgtccatttttacaatacataca 7328
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5984
Number of Sequences: 1807
Number of extensions: 5984
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)